A small RNA-seq visualizer and analysis toolkit


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Documentation for package ‘ssviz’ version 1.40.0

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ssviz-package ssviz
counts counts data
ctrlbam ctrlbam data
getCountMatrix getCountMatrix
getCountMatrix-method getCountMatrix
getCountMatrix-methods getCountMatrix
logicalORmissing-class Class '"logicalORmissing"'
ntfreq ntfreq
ntfreq-method ntfreq
ntfreq-methods ntfreq
pctrlbam pctrlbam data
pingpong pingpong
pingpong-method pingpong
pingpong-methods pingpong
plotDistro plotDistro
plotDistro-method plotDistro
plotDistro-methods plotDistro
plotFreq plotFreq
plotFreq-method plotFreq
plotFreq-methods plotFreq
plotPP plotPP
plotPP-method plotPP
plotPP-methods plotPP
plotRegion plotRegion
plotRegion-method plotRegion
plotRegion-methods plotRegion
ptreatbam ptreatbam data
readBam readBam
readBam-method readBam
readBam-methods readBam
ssviz ssviz
treatbam treatbam data